Scatterplot Matrix in ggplot2
How to make Scatterplot Matrix using `ggpairs()` in ggplot2 with Plotly.
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Default splot plot
The ggpairs()
function of the GGally
package allows to build a great scatterplot matrix.
Scatterplots of each pair of numeric variable are drawn on the left part of the figure. Pearson correlation is displayed on the right. Variable distribution is available on the diagonal.
library(plotly)
library(GGally)
data <- data.frame( var1 = 1:100 + rnorm(100,sd=20), v2 = 1:100 + rnorm(100,sd=27), v3 = rep(1, 100) + rnorm(100, sd = 1))
data$v4 = data$var1 ** 2
data$v5 = -(data$var1 ** 2)
p <- ggpairs(data, title="correlogram with ggpairs()")
ggplotly(p)
Visualize correlation
he ggcorr()
function allows to visualize the correlation of each pair of variable as a square. Note that the method
argument allows to pick the correlation type you desire.
library(plotly)
library(GGally)
data <- data.frame( var1 = 1:100 + rnorm(100,sd=20), v2 = 1:100 + rnorm(100,sd=27), v3 = rep(1, 100) + rnorm(100, sd = 1))
data$v4 = data$var1 ** 2
data$v5 = -(data$var1 ** 2)
p <- ggcorr(data, method = c("everything", "pearson"))
ggplotly(p)
Split by group
It is possible to use ggplot2
aesthetics on the chart, for instance to color each category.
library(plotly)
library(GGally)
data(flea)
p <- ggpairs(flea, columns = 2:4, ggplot2::aes(colour=species))
ggplotly(p)