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# geom_density2d in ggplot2

How to make a density map using geom_density2d.

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### Basic 2D Graph

library(plotly)
beers <- read.csv("https://raw.githubusercontent.com/plotly/datasets/master/beers.csv", stringsAsFactors = FALSE)

p <- ggplot(beers, aes(x=abv, y=ibu)) +
geom_density2d() +
labs(y = "bitterness (IBU)",
x = "alcohol volume (ABV)",
title = "Craft beers from American breweries")

ggplotly(p)


### Filled

Since each of the lines (in the above graph) shows a different "level", setting "fill = stat(level)" allows for a filled graph.

library(plotly)
beers <- read.csv("https://raw.githubusercontent.com/plotly/datasets/master/beers.csv", stringsAsFactors = FALSE)

p <- ggplot(beers, aes(x=abv, y=ibu)) +
stat_density2d(aes(fill = stat(level)), geom="polygon") +
labs(y = "bitterness (IBU)",
x = "alcohol volume (ABV)",
title = "Craft beers from American breweries")

ggplotly(p)


### Preset Colourscale

"Viridis" colourscales are designed to still be perceptible in black-and-white, as well as for those with colourblindness. It comes with five colourscales, selected using the option= parameter: "magma" (or "A"), "inferno" (or "B"), "plasma" (or "C"), "viridis" (or "D", the default), and "cividis" (or "E").

library(plotly)
beers <- read.csv("https://raw.githubusercontent.com/plotly/datasets/master/beers.csv", stringsAsFactors = FALSE)

p <- ggplot(beers, aes(x=abv, y=ibu)) +
stat_density2d(aes(fill = stat(level)), geom="polygon") +
scale_fill_viridis_c(option = "plasma") +
theme(legend.position = "magma") +
labs(y = "bitterness (IBU)",
x = "alcohol volume (ABV)",
title = "Craft beers from American breweries")

ggplotly(p)


### Customized Colourscale

You can also set your own colour gradients by defining a high and low point.

library(plotly)
beers <- read.csv("https://raw.githubusercontent.com/plotly/datasets/master/beers.csv", stringsAsFactors = FALSE)

p <- ggplot(beers, aes(x=abv, y=ibu)) +
stat_density2d(aes(fill = stat(level)), geom="polygon") +
scale_fill_gradient(low = "lightskyblue1", high = "darkred") +
theme(legend.position = "none") +
labs(y = "bitterness (IBU)",
x = "alcohol volume (ABV)",
title = "Craft beers from American breweries")

ggplotly(p)


### Overlaid Points

I use variable "style2" to filter out the six most common beer styles. This way, we can see that the cluster of beers in the top right (i.e. more bitter and higher alcohol content) are IPAs - perhaps unsurprisingly.

library(plotly)
library(dplyr)
beers <- read.csv("https://raw.githubusercontent.com/plotly/datasets/master/beers.csv", stringsAsFactors = FALSE)

p <- ggplot(beers, aes(x=abv, y=ibu)) +
geom_density2d(alpha=0.5) +
geom_point(data=filter(beers, !is.na(style2)), aes(colour=style2, text = label), alpha=0.3) +
labs(y = "bitterness (IBU)",
x = "alcohol volume (ABV)",
title = "Craft beers from American breweries",
colour = "Beer types")

ggplotly(p)


Dash for R is an open-source framework for building analytical applications, with no Javascript required, and it is tightly integrated with the Plotly graphing library.

Learn about how to install Dash for R at https://dashr.plot.ly/installation.

Everywhere in this page that you see fig, you can display the same figure in a Dash for R application by passing it to the figure argument of the Graph component from the built-in dashCoreComponents package like this:

library(plotly)

fig <- plot_ly()
# fig <- fig %>% add_trace( ... )
# fig <- fig %>% layout( ... )

library(dash)
library(dashCoreComponents)
library(dashHtmlComponents)

app <- Dash$new() app$layout(
htmlDiv(
list(
dccGraph(figure=fig)
)
)
) 